JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AQP5_chr12_49956872_49970682	0/0	g0138	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0139	1	0	1	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0140	1	1	0	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0141	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0142	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0143	1	0	1	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0144	1	1	0	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0145	1	1	0	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0146	1	0	1	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0147	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0148	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0149	1	1	0	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0150	1	0	0	0	1	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0151	1	0	0	0	0	1	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0152	1	0	1	0	0	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0153	1	0	0	0	1	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0154	1	0	0	0	0	1	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0155	1	0	0	0	1	0	AQP5	chr12	49956872	49970682
AQP5_chr12_49956872_49970682	0/0	g0156	1	0	0	1	0	0	AQP5	chr12	49956872	49970682
AQP6_chr12_49967947_49982139	0/1	g0001	311	30	49	180	16	35	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	1/0	g0002	50	34	1	12	0	2	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0003	38	0	23	14	0	1	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0004	25	25	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0005	6	0	0	6	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0006	5	5	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0007	3	0	0	3	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0008	2	0	2	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0009	2	2	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0010	2	0	0	2	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0011	1	1	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0012	1	1	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0013	1	1	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0014	1	0	0	1	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0015	1	1	0	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0016	1	0	1	0	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0017	1	0	0	1	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0018	1	0	0	1	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0019	1	0	0	0	1	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0020	1	0	0	1	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0021	1	0	0	1	0	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0022	1	0	0	0	1	0	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0023	1	0	0	0	0	1	AQP6	chr12	49967947	49982139
AQP6_chr12_49967947_49982139	0/0	g0024	1	0	0	0	0	1	AQP6	chr12	49967947	49982139
AQP7B_chr2_94582311_94609628	0/0	g0001	17	1	2	8	1	5	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0002	10	0	1	9	0	0	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0003	6	0	1	5	0	0	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0004	5	0	2	0	1	2	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0005	5	0	0	5	0	0	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0006	4	0	1	0	2	1	AQP7B	chr2	94582311	94609628
AQP7B_chr2_94582311_94609628	0/0	g0007	4	3	1	0	0	0	AQP7B	chr2	94582311	94609628