JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AQP7_chr9_33378191_33407568	0/0	g0320	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0321	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0322	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0323	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0324	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0325	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0326	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0327	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0328	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0329	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0330	1	0	0	0	0	1	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0331	1	0	0	0	1	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0332	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0333	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0334	1	0	0	0	0	1	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0335	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0336	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0337	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0338	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0339	1	0	0	0	0	1	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0340	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0341	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0342	1	0	0	1	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0343	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0344	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0345	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0346	1	0	0	0	0	1	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0347	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0348	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0349	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0350	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0351	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0352	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0353	1	0	1	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0354	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0355	1	1	0	0	0	0	AQP7	chr9	33378191	33407568
AQP7_chr9_33378191_33407568	0/0	g0356	1	0	0	0	0	1	AQP7	chr9	33378191	33407568
AQP8_chr16_25211947_25233932	0/1	g0001	38	0	8	26	1	2	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0002	17	1	0	14	1	1	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0003	14	1	3	8	1	1	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0004	11	0	6	3	1	1	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0005	11	0	3	6	1	1	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0006	10	0	4	0	1	5	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0007	9	0	0	8	1	0	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0008	7	0	1	6	0	0	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0009	7	1	6	0	0	0	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0010	7	1	0	6	0	0	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0011	6	0	0	3	0	3	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0012	6	4	2	0	0	0	AQP8	chr16	25211947	25233932
AQP8_chr16_25211947_25233932	0/0	g0013	5	1	1	0	0	3	AQP8	chr16	25211947	25233932