JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARC_chr8_142606049_142619479	0/0	g0041	1	0	1	0	0	0	ARC	chr8	142606049	142619479
ARC_chr8_142606049_142619479	0/0	g0042	1	1	0	0	0	0	ARC	chr8	142606049	142619479
ARC_chr8_142606049_142619479	1/0	g0043	1	0	0	0	0	0	ARC	chr8	142606049	142619479
ARC_chr8_142606049_142619479	0/0	g0044	1	0	0	0	0	1	ARC	chr8	142606049	142619479
ARC_chr8_142606049_142619479	0/0	g0045	1	1	0	0	0	0	ARC	chr8	142606049	142619479
ARC_chr8_142606049_142619479	0/0	g0046	1	0	0	1	0	0	ARC	chr8	142606049	142619479
AREG_chr4_74440136_74460005	0/0	g0001	106	19	13	60	5	9	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0002	78	11	18	38	4	7	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0003	45	0	0	42	0	3	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	1/1	g0004	24	0	13	0	4	5	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0005	20	0	1	18	0	1	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0006	19	0	4	12	0	3	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0007	14	9	2	3	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0008	8	5	3	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0009	5	4	1	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0010	5	1	1	0	0	3	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0011	4	4	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0012	4	0	0	4	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0013	4	1	1	0	0	2	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0014	4	4	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0015	3	0	0	3	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0016	3	0	0	3	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0017	3	3	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0018	3	0	0	0	0	3	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0019	3	0	0	0	0	3	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0020	2	0	2	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0021	2	0	0	0	0	2	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0022	2	0	0	2	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0023	2	0	0	1	0	1	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0024	2	2	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0025	2	2	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0026	2	2	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0027	2	1	1	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0028	2	1	0	0	1	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0029	2	0	0	2	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0030	2	0	1	0	0	1	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0031	2	2	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0032	2	0	0	2	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0033	2	0	0	2	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0034	1	1	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0035	1	1	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0036	1	0	1	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0037	1	1	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0038	1	1	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0039	1	1	0	0	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0040	1	0	0	1	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0041	1	0	0	1	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0042	1	0	0	1	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0043	1	0	0	1	0	0	AREG	chr4	74440136	74460005
AREG_chr4_74440136_74460005	0/0	g0044	1	0	0	1	0	0	AREG	chr4	74440136	74460005