JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABHD18_chr4_127960406_128044953	0/0	g0331	1	0	0	1	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0332	1	0	0	1	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0333	1	0	0	1	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0334	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0335	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0336	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0337	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0338	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0339	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0340	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0341	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0342	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0343	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	0/0	g0344	1	1	0	0	0	0	ABHD18	chr4	127960406	128044953
ABHD1_chr2_27118815_27135812	0/1	g0001	81	3	14	49	3	11	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0002	45	6	7	22	3	7	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0003	30	1	4	19	3	3	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0004	22	0	2	18	0	2	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0005	21	10	7	0	3	1	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0006	12	0	5	6	0	1	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0007	12	0	0	12	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0008	11	0	2	3	2	4	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0009	8	6	2	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0010	6	0	3	3	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0011	5	4	1	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0012	4	3	1	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0013	4	0	1	3	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0014	4	0	0	4	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0015	3	0	3	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0016	3	1	1	1	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0017	3	0	0	3	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0018	3	2	1	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0019	3	0	0	3	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0020	3	3	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0021	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0022	2	0	0	2	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0023	2	0	1	1	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0024	2	0	1	0	1	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0025	2	1	0	0	0	1	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0026	2	0	1	1	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0027	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0028	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0029	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0030	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0031	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0032	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0033	2	0	2	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0034	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0035	2	2	0	0	0	0	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	0/0	g0036	1	1	0	0	0	0	ABHD1	chr2	27118815	27135812