JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARHGAP32_chr11_128960060_129197325	0/0	g0387	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0388	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0389	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0390	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0391	1	1	0	0	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0392	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0393	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0394	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0395	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP32_chr11_128960060_129197325	0/0	g0396	1	0	0	1	0	0	ARHGAP32	chr11	128960060	129197325
ARHGAP33_chr19_35770564_35793822	1/0	g0001	52	6	17	14	4	10	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0002	33	2	6	25	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0003	25	6	8	5	2	4	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0004	24	0	2	17	0	5	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0005	24	0	0	24	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/1	g0006	23	3	15	0	1	3	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0007	21	6	4	7	3	1	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0008	20	7	5	5	1	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0009	17	0	0	15	0	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0010	14	0	1	13	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0011	14	0	0	12	0	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0012	13	0	4	9	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0013	11	10	1	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0014	8	8	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0015	7	6	1	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0016	5	0	3	2	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0017	4	0	0	0	0	4	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0018	4	4	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0019	4	4	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0020	4	0	0	4	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0021	3	3	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0022	3	3	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0023	3	0	0	3	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0024	3	0	0	0	0	3	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0025	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0026	2	0	0	0	0	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0027	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0028	2	0	0	2	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0029	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0030	2	0	1	0	1	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0031	2	0	0	2	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0032	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0033	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0034	2	2	0	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0035	2	0	0	2	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0036	2	0	0	0	0	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0037	2	1	1	0	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0038	2	0	0	0	0	2	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0039	1	0	0	1	0	0	ARHGAP33	chr19	35770564	35793822
ARHGAP33_chr19_35770564_35793822	0/0	g0040	1	1	0	0	0	0	ARHGAP33	chr19	35770564	35793822