JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABHD3_chr18_21645901_21709774	0/0	g0281	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0282	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0283	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0284	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0285	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0286	1	0	1	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0287	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0288	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0289	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	0/0	g0290	1	1	0	0	0	0	ABHD3	chr18	21645901	21709774
ABHD4_chr14_22593300_22617963	0/0	g0001	35	1	8	23	1	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	1/0	g0002	23	1	8	11	0	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0003	21	0	3	17	1	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0004	20	0	11	2	3	4	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0005	20	1	3	14	0	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0006	11	1	0	7	1	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0007	10	1	2	4	0	3	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0008	8	0	0	7	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0009	8	0	0	8	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0010	7	0	1	5	1	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0011	6	5	1	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0012	6	6	0	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0013	6	0	0	5	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0014	6	0	2	2	2	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0015	4	0	2	0	2	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0016	4	0	2	1	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0017	4	3	1	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0018	4	0	0	4	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0019	4	4	0	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/1	g0020	4	0	0	0	0	3	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0021	4	0	0	0	0	4	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0022	4	0	4	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0023	3	0	1	0	0	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0024	3	0	0	3	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0025	3	0	0	1	1	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0026	3	1	1	0	1	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0027	3	0	0	3	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0028	3	0	0	3	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0029	3	3	0	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0030	3	3	0	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0031	3	0	2	0	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0032	3	2	1	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0033	3	3	0	0	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0034	3	0	2	0	1	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0035	3	2	0	0	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0036	3	0	0	3	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0037	3	0	0	3	0	0	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0038	3	0	0	2	0	1	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0039	3	0	1	0	0	2	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	0/0	g0040	2	0	0	2	0	0	ABHD4	chr14	22593300	22617963