JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARID3B_chr15_74536220_74603131	0/0	g0315	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0316	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0317	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0318	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0319	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0320	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0321	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0322	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0323	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0324	1	0	0	1	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0325	1	0	1	0	0	0	ARID3B	chr15	74536220	74603131
ARID3B_chr15_74536220_74603131	0/0	g0326	1	1	0	0	0	0	ARID3B	chr15	74536220	74603131
ARID3C_chr9_34616049_34634066	0/0	g0001	82	6	4	62	2	8	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0002	77	19	10	45	1	2	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/1	g0003	49	10	18	10	3	7	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0004	36	3	14	9	2	8	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0005	30	2	2	26	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0006	12	0	4	6	0	2	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0007	9	0	4	0	2	3	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0008	9	2	1	0	0	6	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0009	9	0	0	8	0	1	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0010	9	8	1	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0011	8	7	1	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0012	7	0	6	1	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0013	6	6	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0014	6	4	2	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0015	6	0	0	6	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0016	4	4	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	1/0	g0017	4	3	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0018	3	0	0	0	0	3	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0019	3	3	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0020	3	0	3	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0021	3	0	0	3	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0022	2	0	0	0	2	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0023	2	2	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0024	2	2	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0025	2	0	0	0	2	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0026	2	0	0	2	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0027	2	0	0	2	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0028	2	1	1	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0029	2	1	1	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0030	2	0	2	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0031	2	2	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0032	2	0	0	2	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0033	1	1	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0034	1	1	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0035	1	0	0	1	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0036	1	1	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0037	1	1	0	0	0	0	ARID3C	chr9	34616049	34634066
ARID3C_chr9_34616049_34634066	0/0	g0038	1	1	0	0	0	0	ARID3C	chr9	34616049	34634066