JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARL17B_chr17_46329902_46366766	0/0	g0002	2	2	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0003	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0004	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0005	1	0	0	0	0	1	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0006	1	0	1	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0007	1	0	0	1	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0008	1	0	1	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0009	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0010	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0011	1	0	0	1	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0012	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0013	1	0	0	0	0	1	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0014	1	0	0	1	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0015	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0016	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0017	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0018	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0019	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0020	1	0	0	0	0	1	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0021	1	0	0	0	0	1	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0022	1	1	0	0	0	0	ARL17B	chr17	46329902	46366766
ARL17B_chr17_46329902_46366766	0/0	g0023	1	0	0	1	0	0	ARL17B	chr17	46329902	46366766
ARL1_chr12_101388116_101412772	0/0	g0001	45	2	12	23	2	6	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0002	42	9	3	29	0	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0003	22	0	0	22	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0004	13	1	2	2	3	5	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0005	12	0	4	0	3	5	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0006	11	0	4	6	0	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	1/0	g0007	11	0	3	3	1	3	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0008	11	9	2	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0009	10	0	0	10	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0010	9	0	0	8	0	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0011	7	7	0	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0012	7	0	0	7	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0013	7	0	0	3	0	4	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0014	6	0	6	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0015	6	0	3	1	1	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0016	5	5	0	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0017	5	0	0	5	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0018	4	0	0	4	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0019	4	4	0	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0020	4	0	2	0	0	2	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0021	4	0	2	2	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0022	4	1	0	3	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0023	4	0	0	0	3	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0024	3	2	1	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0025	3	1	0	2	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0026	3	0	1	1	0	1	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0027	3	3	0	0	0	0	ARL1	chr12	101388116	101412772
ARL1_chr12_101388116_101412772	0/0	g0028	3	1	0	2	0	0	ARL1	chr12	101388116	101412772