JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARL2BP_chr16_57240259_57258635	0/0	g0044	1	0	0	0	0	1	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0045	1	0	0	0	0	1	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0046	1	0	0	1	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0047	1	0	0	1	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0048	1	1	0	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0049	1	1	0	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0050	1	0	0	0	1	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0051	1	0	1	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0052	1	1	0	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0053	1	0	0	1	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0054	1	1	0	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0055	1	0	1	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0056	1	1	0	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0057	1	0	0	1	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0058	1	0	0	0	0	1	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0059	1	0	0	0	0	1	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0060	1	0	0	1	0	0	ARL2BP	chr16	57240259	57258635
ARL2BP_chr16_57240259_57258635	0/0	g0061	1	0	1	0	0	0	ARL2BP	chr16	57240259	57258635
ARL2_chr11_65009160_65027184	0/1	g0001	122	22	25	59	1	14	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0002	58	13	12	24	6	3	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0003	17	2	9	0	1	5	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0004	13	0	1	7	1	4	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0005	9	9	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0006	9	7	2	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0007	8	8	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0008	6	0	4	0	1	1	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0009	4	4	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0010	4	0	0	4	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0011	4	0	3	0	1	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0012	4	1	2	1	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0013	4	4	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0014	3	1	1	1	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0015	3	3	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0016	3	2	1	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0017	2	0	0	2	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0018	2	2	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0019	2	1	0	0	1	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0020	2	2	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0021	2	0	0	2	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0022	2	1	0	1	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0023	2	0	0	2	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0024	2	0	0	0	0	2	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0025	2	0	2	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0026	2	2	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0027	2	0	0	0	0	2	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0028	2	0	0	1	0	1	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	1/0	g0029	2	0	1	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0030	1	0	0	1	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0031	1	1	0	0	0	0	ARL2	chr11	65009160	65027184
ARL2_chr11_65009160_65027184	0/0	g0032	1	1	0	0	0	0	ARL2	chr11	65009160	65027184