JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARMH4_chr14_57995761_58157213	0/0	g0237	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0238	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0239	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0240	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0241	1	0	0	0	1	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0242	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0243	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0244	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0245	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0246	1	1	0	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/1	g0247	1	0	0	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0248	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0249	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0250	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0251	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0252	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0253	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0254	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0255	1	0	0	1	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0256	1	0	1	0	0	0	ARMH4	chr14	57995761	58157213
ARMH4_chr14_57995761_58157213	0/0	g0257	1	1	0	0	0	0	ARMH4	chr14	57995761	58157213
ARMS2_chr10_122449653_122462352	1/0	g0001	138	19	42	54	6	16	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/1	g0002	103	14	18	59	4	7	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0003	57	2	5	41	4	5	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0004	29	7	4	14	3	1	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0005	15	1	5	0	0	9	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0006	13	13	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0007	12	1	0	11	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0008	8	6	2	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0009	7	7	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0010	6	6	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0011	5	4	0	0	0	1	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0012	3	2	0	1	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0013	3	3	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0014	2	1	0	0	0	1	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0015	2	2	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0016	2	0	0	2	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0017	2	2	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0018	2	2	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0019	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0020	1	0	0	1	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0021	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0022	1	0	0	1	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0023	1	0	0	0	1	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0024	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0025	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0026	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0027	1	0	0	1	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0028	1	0	1	0	0	0	ARMS2	chr10	122449653	122462352
ARMS2_chr10_122449653_122462352	0/0	g0029	1	1	0	0	0	0	ARMS2	chr10	122449653	122462352