JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARPC3_chr12_110429823_110455337	0/0	g0252	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0253	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0254	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0255	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0256	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0257	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0258	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0259	1	1	0	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0260	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0261	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0262	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0263	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0264	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC3_chr12_110429823_110455337	0/0	g0265	1	0	1	0	0	0	ARPC3	chr12	110429823	110455337
ARPC4_chr3_9788082_9812101	0/1	g0001	19	2	8	2	2	4	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0002	15	7	1	7	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0003	13	0	0	13	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0004	13	1	2	9	0	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0005	12	0	1	10	0	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0006	10	0	6	0	3	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0007	10	0	1	5	0	4	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0008	9	4	1	0	2	2	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0009	9	0	5	4	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0010	9	0	0	9	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0011	7	0	0	7	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0012	5	0	2	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0013	5	2	0	1	1	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0014	5	1	4	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0015	5	0	5	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0016	5	5	0	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0017	4	2	1	0	1	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0018	4	1	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0019	4	4	0	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0020	4	0	0	4	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0021	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0022	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0023	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0024	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0025	3	0	0	1	2	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0026	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0027	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0028	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0029	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0030	3	0	0	3	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0031	2	0	2	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0032	2	0	1	0	0	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0033	2	1	1	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0034	2	0	0	2	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0035	2	0	0	0	0	2	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0036	2	0	0	0	1	1	ARPC4	chr3	9788082	9812101