JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARPC4_chr3_9788082_9812101	0/0	g0237	1	0	0	0	0	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0238	1	0	0	1	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0239	1	0	1	0	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0240	1	0	0	1	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0241	1	0	0	0	1	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0242	1	0	0	0	0	1	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0243	1	0	0	1	0	0	ARPC4	chr3	9788082	9812101
ARPC4_chr3_9788082_9812101	0/0	g0244	1	0	0	1	0	0	ARPC4	chr3	9788082	9812101
ARPC5L_chr9_124857130_124882733	0/0	g0001	59	6	17	21	6	9	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/1	g0002	58	8	8	34	2	5	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0003	24	0	0	20	0	4	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0004	7	0	2	5	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0005	6	0	0	6	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0006	6	1	0	4	0	1	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0007	5	0	5	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0008	5	0	1	4	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0009	5	5	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0010	5	5	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0011	4	0	0	4	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0012	4	0	1	3	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0013	4	3	1	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0014	4	3	1	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0015	4	4	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0016	4	4	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0017	4	4	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0018	4	0	1	3	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0019	4	0	1	2	1	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0020	4	4	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0021	3	3	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0022	3	0	1	1	1	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0023	3	3	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0024	3	0	0	2	0	1	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0025	3	0	0	3	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0026	3	0	1	1	0	1	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0027	3	1	1	0	1	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0028	3	3	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0029	3	3	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0030	3	0	0	3	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0031	3	0	0	3	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0032	2	1	1	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0033	2	0	0	0	2	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0034	2	0	0	2	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0035	2	0	0	1	0	1	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0036	2	0	0	0	0	2	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0037	2	0	0	2	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0038	2	2	0	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0039	2	0	2	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0040	2	0	2	0	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0041	2	0	0	2	0	0	ARPC5L	chr9	124857130	124882733
ARPC5L_chr9_124857130_124882733	0/0	g0042	2	0	1	0	0	1	ARPC5L	chr9	124857130	124882733