JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARRB1_chr11_75255122_75356661	0/0	g0305	1	1	0	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0306	1	0	0	1	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0307	1	0	0	1	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0308	1	1	0	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0309	1	0	1	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0310	1	1	0	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0311	1	0	0	1	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0312	1	0	0	1	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0313	1	1	0	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0314	1	0	0	0	0	1	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0315	1	0	0	0	0	1	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0316	1	0	0	0	1	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0317	1	0	1	0	0	0	ARRB1	chr11	75255122	75356661
ARRB1_chr11_75255122_75356661	0/0	g0318	1	0	1	0	0	0	ARRB1	chr11	75255122	75356661
ARRB2_chr17_4705632_4726497	0/0	g0001	44	12	9	16	0	7	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0002	23	3	3	13	1	3	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0003	19	0	5	11	0	3	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0004	13	0	6	5	1	1	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0005	11	1	0	10	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0006	10	0	6	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0007	9	0	0	7	0	2	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0008	8	1	1	1	1	4	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0009	8	7	1	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0010	8	0	5	0	2	1	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0011	8	0	0	8	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	1/0	g0012	8	7	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0013	7	0	4	2	1	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0014	6	6	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0015	6	0	0	4	0	2	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0016	6	0	0	6	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0017	5	5	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0018	5	2	1	0	1	1	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0019	5	0	0	5	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0020	4	0	1	0	2	1	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0021	4	4	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0022	4	4	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0023	4	0	0	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0024	4	0	3	1	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0025	4	0	0	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0026	4	0	0	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0027	4	0	1	1	0	2	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0028	4	0	0	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0029	4	0	0	4	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0030	3	0	0	3	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0031	3	3	0	0	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0032	3	0	2	0	0	1	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0033	3	0	1	1	1	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0034	3	0	0	3	0	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0035	3	1	1	0	1	0	ARRB2	chr17	4705632	4726497
ARRB2_chr17_4705632_4726497	0/0	g0036	3	0	0	1	0	2	ARRB2	chr17	4705632	4726497