JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ARRDC2_chr19_18003170_18019102	0/0	g0078	1	0	0	1	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0079	1	0	1	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0080	1	0	0	0	0	1	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0081	1	0	0	0	0	1	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0082	1	0	0	1	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0083	1	1	0	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0084	1	1	0	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0085	1	0	0	1	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0086	1	0	0	1	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0087	1	0	1	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0088	1	0	0	1	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0089	1	0	0	0	1	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0090	1	0	0	0	0	1	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0091	1	1	0	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0092	1	1	0	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0093	1	1	0	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC2_chr19_18003170_18019102	0/0	g0094	1	0	1	0	0	0	ARRDC2	chr19	18003170	18019102
ARRDC3_chr5_91363631_91388317	0/0	g0001	57	6	6	35	3	7	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0002	52	11	5	31	1	4	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0003	28	0	9	9	2	8	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/1	g0004	23	0	4	14	0	4	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0005	16	0	7	9	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0006	14	0	0	4	2	8	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0007	11	0	0	10	0	1	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0008	10	2	4	4	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0009	8	0	0	8	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0010	7	6	1	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0011	5	3	2	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0012	5	5	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0013	5	2	1	2	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0014	5	5	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0015	4	0	0	4	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0016	4	4	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0017	4	0	0	4	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0018	4	0	0	4	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0019	4	1	0	2	0	1	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0020	4	4	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0021	4	0	3	0	1	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0022	3	0	2	1	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0023	3	0	0	0	0	3	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0024	3	0	0	3	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0025	3	0	0	3	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0026	3	0	3	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0027	3	1	0	2	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0028	2	0	1	1	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0029	2	0	0	2	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0030	2	2	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0031	2	2	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0032	2	2	0	0	0	0	ARRDC3	chr5	91363631	91388317
ARRDC3_chr5_91363631_91388317	0/0	g0033	2	2	0	0	0	0	ARRDC3	chr5	91363631	91388317