JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	SAS	genename	chr	start	end
ARSI_chr5_150291343_150307905	0/0	g0042	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0043	1	0	0	0	1	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0044	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0045	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0046	1	0	0	1	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0047	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0048	1	0	0	1	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0049	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0050	1	0	1	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0051	1	0	1	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0052	1	0	0	1	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0053	1	0	0	0	1	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0054	1	0	1	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0055	1	0	0	1	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0056	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0057	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0058	1	0	1	0	0	ARSI	chr5	150291343	150307905
ARSI_chr5_150291343_150307905	0/0	g0059	1	1	0	0	0	ARSI	chr5	150291343	150307905
ARSJ_chr4_113895284_113984647	0/0	g0001	4	0	0	4	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0002	3	3	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0003	3	0	0	3	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0004	3	0	0	3	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0005	3	0	0	3	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0006	2	2	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0007	2	1	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0008	2	0	0	0	2	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0009	2	0	2	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0010	2	0	0	2	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0011	2	2	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0012	2	0	0	2	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0013	2	2	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0014	2	2	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0015	2	0	0	2	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0016	2	0	0	2	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0017	2	0	0	2	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0018	2	0	0	0	2	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0019	2	0	2	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0020	1	1	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0021	1	1	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0022	1	1	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0023	1	0	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0024	1	1	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0025	1	1	0	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0026	1	0	0	1	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0027	1	0	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0028	1	0	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0029	1	0	0	1	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0030	1	0	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0031	1	0	1	0	0	ARSJ	chr4	113895284	113984647
ARSJ_chr4_113895284_113984647	0/0	g0032	1	0	1	0	0	ARSJ	chr4	113895284	113984647