JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASAH1_chr8_18050992_18089107	0/0	g0277	1	1	0	0	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0278	1	0	0	0	0	1	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0279	1	1	0	0	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0280	1	0	0	1	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0281	1	1	0	0	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0282	1	1	0	0	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0283	1	1	0	0	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0284	1	0	0	1	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0285	1	0	0	1	0	0	ASAH1	chr8	18050992	18089107
ASAH1_chr8_18050992_18089107	0/0	g0286	1	0	0	1	0	0	ASAH1	chr8	18050992	18089107
ASAH2B_chr10_50734936_50764255	0/1	g0001	81	5	20	45	3	7	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0002	43	0	1	38	0	4	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0003	31	7	1	19	0	4	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0004	22	0	5	16	0	1	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0005	17	12	3	0	0	2	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0006	9	0	0	8	0	1	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0007	8	8	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0008	8	0	0	8	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0009	6	4	1	0	0	1	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0010	6	1	1	1	2	1	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0011	6	0	0	6	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0012	5	1	2	0	0	2	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0013	5	0	0	5	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0014	5	0	3	0	2	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0015	5	0	2	3	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0016	5	0	0	5	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0017	4	4	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0018	4	2	2	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0019	4	0	3	0	1	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0020	3	3	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	1/0	g0021	3	0	2	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0022	3	0	0	1	0	2	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0023	3	3	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0024	3	0	3	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0025	3	0	0	0	0	3	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0026	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0027	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0028	2	0	0	0	0	2	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0029	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0030	2	1	1	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0031	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0032	2	0	0	1	0	1	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0033	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0034	2	2	0	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0035	2	0	0	2	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0036	2	0	0	2	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0037	2	0	0	2	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0038	2	0	2	0	0	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0039	2	0	0	1	1	0	ASAH2B	chr10	50734936	50764255
ASAH2B_chr10_50734936_50764255	0/0	g0040	2	0	2	0	0	0	ASAH2B	chr10	50734936	50764255