JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASB13_chr10_5633867_5671595	0/1	g0394	1	0	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0395	1	0	0	0	0	1	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0396	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0397	1	0	0	0	1	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0398	1	0	1	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0399	1	0	0	0	1	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0400	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0401	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0402	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0403	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0404	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0405	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0406	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0407	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0408	1	0	0	1	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0409	1	0	1	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0410	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0411	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0412	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0413	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0414	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0415	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0416	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0417	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0418	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0419	1	1	0	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0420	1	0	1	0	0	0	ASB13	chr10	5633867	5671595
ASB13_chr10_5633867_5671595	0/0	g0421	1	0	1	0	0	0	ASB13	chr10	5633867	5671595
ASB14_chr3_57263342_57297685	0/0	g0001	12	0	7	0	2	3	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0002	8	7	1	0	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/1	g0003	7	0	4	0	0	2	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0004	6	0	3	0	1	2	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0005	5	0	2	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0006	4	0	1	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0007	3	0	0	0	0	3	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0008	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0009	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0010	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0011	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0012	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0013	3	0	0	3	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0014	3	3	0	0	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0015	2	0	2	0	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0016	2	0	0	2	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0017	2	0	0	1	0	1	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0018	2	0	0	2	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0019	2	0	2	0	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0020	2	2	0	0	0	0	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0021	2	0	0	0	0	2	ASB14	chr3	57263342	57297685
ASB14_chr3_57263342_57297685	0/0	g0022	2	1	0	0	0	1	ASB14	chr3	57263342	57297685