JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASF1B_chr19_14114512_14141589	0/0	g0233	1	0	0	1	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0234	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0235	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0236	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0237	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0238	1	0	1	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0239	1	0	1	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0240	1	0	1	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0241	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASF1B_chr19_14114512_14141589	0/0	g0242	1	1	0	0	0	0	ASF1B	chr19	14114512	14141589
ASGR1_chr17_7168431_7184370	0/0	g0001	64	3	9	50	0	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	1/0	g0002	35	0	7	25	0	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0003	29	1	7	15	4	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0004	26	5	5	0	8	8	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0005	16	0	3	10	2	1	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0006	12	0	2	10	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0007	12	7	0	0	1	4	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0008	12	0	0	12	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0009	8	0	0	7	0	1	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0010	8	1	2	3	0	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0011	5	5	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0012	5	0	0	5	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0013	5	5	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0014	4	0	3	0	0	1	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0015	4	0	0	4	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0016	4	4	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0017	4	0	3	0	1	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0018	4	0	0	4	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0019	3	0	1	1	0	1	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0020	3	0	1	0	0	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0021	3	0	0	3	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0022	3	0	2	1	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0023	3	3	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0024	3	0	3	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/1	g0025	3	1	1	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0026	3	3	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0027	3	3	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0028	3	2	1	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0029	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0030	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0031	2	0	2	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0032	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0033	2	2	0	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0034	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0035	2	0	0	1	0	1	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0036	2	1	1	0	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0037	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0038	2	0	0	2	0	0	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0039	2	0	0	0	0	2	ASGR1	chr17	7168431	7184370
ASGR1_chr17_7168431_7184370	0/0	g0040	2	0	0	0	0	2	ASGR1	chr17	7168431	7184370