Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AACS_chr12_125060435_125148316	0/0	g0330	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0331	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0332	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0333	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0334	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0335	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0336	1	0	1	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0337	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0338	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0339	1	0	1	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0340	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0341	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0342	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0343	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0344	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0345	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0346	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0347	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0348	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0349	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0350	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0351	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0352	1	0	0	1	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0353	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0354	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0355	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0356	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0357	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0358	1	1	0	0	0	0	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	0/0	g0359	1	0	0	0	0	1	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	0/0	g0001	39	4	5	27	1	2	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0002	29	7	0	21	1	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0003	28	0	0	28	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0004	27	10	12	1	2	2	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0005	23	0	1	18	0	4	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0006	19	2	4	10	0	3	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	1/0	g0007	10	0	5	1	1	2	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0008	10	0	6	1	3	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0009	10	0	0	10	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0010	8	0	0	3	2	3	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0011	8	0	5	0	2	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0012	5	5	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0013	5	0	0	5	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0014	5	0	2	1	1	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0015	5	0	4	0	0	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0016	4	4	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0017	4	0	0	4	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0018	4	0	0	4	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0019	3	0	3	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0020	3	3	0	0	0	0	AADACL2	chr3	151728927	151766339