JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASH2L_chr8_38100529_38145080	0/0	g0281	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0282	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0283	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0284	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0285	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0286	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0287	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0288	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0289	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0290	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0291	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0292	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0293	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0294	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0295	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0296	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0297	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0298	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0299	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0300	1	0	0	1	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0301	1	0	1	0	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0302	1	1	0	0	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0303	1	1	0	0	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0304	1	1	0	0	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0305	1	1	0	0	0	0	ASH2L	chr8	38100529	38145080
ASH2L_chr8_38100529_38145080	0/0	g0306	1	1	0	0	0	0	ASH2L	chr8	38100529	38145080
ASIC1_chr12_50052596_50088611	0/0	g0001	26	0	5	19	0	2	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0002	18	1	4	10	2	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0003	11	7	3	1	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0004	10	0	1	8	0	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0005	7	0	5	1	0	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0006	7	5	2	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0007	7	7	0	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0008	6	6	0	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0009	6	0	4	0	0	2	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0010	6	0	4	0	1	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0011	5	0	0	4	0	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0012	5	0	0	5	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0013	5	0	4	1	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0014	4	0	1	3	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0015	4	0	1	0	1	2	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0016	4	0	2	2	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0017	3	0	1	0	2	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0018	3	0	2	0	0	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0019	3	0	0	2	0	1	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0020	3	1	2	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0021	3	2	1	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0022	3	0	0	3	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0023	2	2	0	0	0	0	ASIC1	chr12	50052596	50088611
ASIC1_chr12_50052596_50088611	0/0	g0024	2	2	0	0	0	0	ASIC1	chr12	50052596	50088611