JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASNS_chr7_97846677_97877408	0/0	g0221	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0222	1	0	0	1	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0223	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0224	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0225	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0226	1	0	0	0	0	1	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0227	1	0	0	1	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0228	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0229	1	0	0	1	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0230	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0231	1	0	0	1	0	0	ASNS	chr7	97846677	97877408
ASNS_chr7_97846677_97877408	0/0	g0232	1	1	0	0	0	0	ASNS	chr7	97846677	97877408
ASPA_chr17_3470997_3508405	0/0	g0001	5	0	0	5	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0002	5	0	0	4	0	1	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0003	5	0	2	1	1	1	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0004	4	0	0	4	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0005	4	0	0	4	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0006	4	0	3	0	1	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0007	4	0	1	2	0	1	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0008	4	0	0	4	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0009	3	0	0	3	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0010	3	0	0	3	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0011	3	0	0	3	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0012	3	0	0	3	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0013	3	0	0	0	0	3	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0014	3	2	0	0	1	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0015	3	0	2	0	1	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0016	3	3	0	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0017	2	0	0	0	1	1	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0018	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0019	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0020	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0021	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0022	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0023	2	0	1	0	1	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0024	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0025	2	0	2	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0026	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0027	2	2	0	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0028	2	2	0	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0029	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0030	2	0	2	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0031	2	0	2	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	1/0	g0032	2	1	0	0	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0033	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0034	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0035	2	0	1	1	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0036	2	0	1	1	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0037	2	0	0	2	0	0	ASPA	chr17	3470997	3508405
ASPA_chr17_3470997_3508405	0/0	g0038	2	0	0	2	0	0	ASPA	chr17	3470997	3508405