JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ASPG_chr14_104080700_104120582	0/0	g0237	1	0	1	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0238	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0239	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0240	1	0	1	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0241	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0242	1	0	0	0	0	1	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0243	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0244	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0245	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0246	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0247	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0248	1	1	0	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0249	1	0	0	1	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0250	1	0	1	0	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0251	1	0	0	1	0	0	ASPG	chr14	104080700	104120582
ASPG_chr14_104080700_104120582	0/0	g0252	1	0	0	1	0	0	ASPG	chr14	104080700	104120582
ASPHD1_chr16_29895488_29911056	1/1	g0001	115	1	20	65	6	21	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0002	59	5	13	24	6	11	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0003	49	22	12	10	1	4	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0004	12	12	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0005	11	0	4	6	0	1	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0006	10	0	0	10	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0007	10	0	1	8	0	1	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0008	7	0	0	7	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0009	7	1	1	3	2	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0010	7	0	0	5	0	2	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0011	6	4	1	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0012	6	2	4	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0013	6	6	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0014	5	4	0	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0015	5	5	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0016	4	0	2	1	1	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0017	4	2	0	1	0	1	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0018	4	3	0	0	0	1	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0019	3	0	0	0	0	3	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0020	3	0	0	3	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0021	3	0	0	3	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0022	2	0	2	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0023	2	0	0	2	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0024	2	0	0	2	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0025	2	1	0	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0026	2	2	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0027	2	0	0	2	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0028	2	2	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0029	2	1	0	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0030	2	2	0	0	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0031	2	0	0	2	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0032	1	0	0	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0033	1	0	0	1	0	0	ASPHD1	chr16	29895488	29911056
ASPHD1_chr16_29895488_29911056	0/0	g0034	1	0	0	1	0	0	ASPHD1	chr16	29895488	29911056