JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATF5_chr19_49924205_49938935	1/0	g0013	6	0	3	0	1	1	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0014	6	3	0	3	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0015	6	0	0	6	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0016	5	5	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0017	5	0	0	0	0	5	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0018	4	0	0	4	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0019	4	0	0	4	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0020	3	0	2	0	1	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0021	3	3	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0022	3	2	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0023	3	1	0	0	0	2	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0024	3	3	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0025	3	3	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0026	2	2	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0027	2	0	1	0	0	1	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0028	2	0	0	2	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0029	2	0	0	2	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0030	2	2	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0031	2	2	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0032	1	0	0	0	0	1	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0033	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0034	1	0	1	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0035	1	0	1	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0036	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0037	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0038	1	0	1	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0039	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0040	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0041	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0042	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0043	1	0	0	0	0	1	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0044	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0045	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0046	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0047	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0048	1	1	0	0	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0049	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF5_chr19_49924205_49938935	0/0	g0050	1	0	0	1	0	0	ATF5	chr19	49924205	49938935
ATF6B_chr6_32110264_32133246	0/0	g0001	54	12	9	27	2	4	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0002	40	2	6	26	2	4	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0003	26	4	1	20	0	1	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0004	23	7	6	8	0	2	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0005	19	0	0	19	0	0	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0006	12	1	1	10	0	0	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0007	12	2	5	3	0	2	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0008	11	0	6	4	0	1	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0009	8	0	2	4	1	1	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0010	8	5	3	0	0	0	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0011	8	4	3	0	1	0	ATF6B	chr6	32110264	32133246
ATF6B_chr6_32110264_32133246	0/0	g0012	6	1	0	3	0	2	ATF6B	chr6	32110264	32133246