JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATG10_chr5_81967023_82261133	0/0	g0193	1	0	0	0	0	1	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0194	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0195	1	0	1	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0196	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0197	1	0	0	0	0	1	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0198	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0199	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0200	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0201	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0202	1	0	1	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0203	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0204	1	0	0	0	0	1	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0205	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0206	1	0	0	1	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0207	1	0	1	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0208	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0209	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0210	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0211	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0212	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0213	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0214	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0215	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0216	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0217	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0218	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0219	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	1/0	g0220	1	0	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0221	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0222	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0223	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0224	1	0	1	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0225	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG10_chr5_81967023_82261133	0/0	g0226	1	1	0	0	0	0	ATG10	chr5	81967023	82261133
ATG12_chr5_115823200_115846565	0/0	g0001	41	0	5	35	1	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0002	35	1	8	19	3	4	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	1/0	g0003	29	2	4	20	0	2	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0004	8	0	0	8	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0005	8	2	0	3	0	3	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0006	8	4	2	0	0	2	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0007	8	0	0	8	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0008	7	2	1	3	0	1	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0009	6	6	0	0	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0010	6	0	3	0	3	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0011	5	5	0	0	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0012	5	1	3	0	1	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0013	5	1	3	0	1	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0014	5	0	0	5	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0015	5	5	0	0	0	0	ATG12	chr5	115823200	115846565
ATG12_chr5_115823200_115846565	0/0	g0016	5	0	4	1	0	0	ATG12	chr5	115823200	115846565