Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AADACL2_chr3_151728927_151766339	0/0	g0121	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0122	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0123	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0124	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0125	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0126	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0127	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0128	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0129	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0130	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0131	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0132	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0133	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0134	1	0	0	0	0	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0135	1	0	0	0	0	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0136	1	0	0	0	0	1	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0137	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0138	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0139	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0140	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0141	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0142	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0143	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0144	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0145	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0146	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0147	1	0	1	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0148	1	1	0	0	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0149	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0150	1	0	0	0	1	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0151	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	0/0	g0152	1	0	0	1	0	0	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	1/0	g0001	75	3	18	44	4	5	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0002	43	12	10	13	2	6	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/1	g0003	23	3	5	12	0	2	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0004	18	0	3	15	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0005	15	3	0	9	2	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0006	12	0	2	10	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0007	10	8	2	0	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0008	9	2	6	0	0	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0009	8	0	0	8	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0010	8	0	0	7	0	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0011	6	1	1	3	0	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0012	5	0	0	4	0	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0013	5	5	0	0	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0014	5	0	0	1	1	3	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0015	5	0	4	0	0	1	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0016	5	0	0	5	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0017	4	0	0	4	0	0	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	0/0	g0018	4	0	1	3	0	0	AADACL3	chr1	12711110	12733760