JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATP5F1A_chr18_46075248_46103296	0/0	g0260	1	1	0	0	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0261	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0262	1	0	1	0	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0263	1	0	0	0	0	1	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0264	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0265	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0266	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0267	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0268	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0269	1	0	0	1	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0270	1	0	0	0	0	1	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0271	1	0	0	0	0	1	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0272	1	0	0	0	1	0	ATP5F1A	chr18	46075248	46103296
ATP5F1A_chr18_46075248_46103296	0/0	g0273	1	0	1	0	0	0	ATP5F1A	chr18	46075248	46103296
ATP5F1B_chr12_56633175_56650984	1/0	g0001	109	9	30	50	7	12	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0002	69	7	15	38	3	6	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0003	20	0	0	20	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0004	18	0	0	15	0	3	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0005	16	8	3	3	0	2	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0006	15	15	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0007	10	9	1	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/1	g0008	10	0	5	0	4	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0009	10	1	1	6	0	2	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0010	9	9	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0011	9	8	0	0	1	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0012	8	7	1	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0013	5	0	0	5	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0014	5	0	2	1	0	2	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0015	5	0	0	5	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0016	4	4	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0017	3	0	0	3	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0018	3	0	3	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0019	3	0	0	3	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0020	3	0	0	0	0	3	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0021	3	0	0	3	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0022	3	0	0	3	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0023	2	0	0	2	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0024	2	2	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0025	2	2	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0026	2	2	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0027	2	0	1	0	0	1	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0028	2	0	0	2	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0029	2	0	0	2	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0030	1	0	0	1	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0031	1	0	0	1	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0032	1	0	0	1	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0033	1	1	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0034	1	1	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0035	1	1	0	0	0	0	ATP5F1B	chr12	56633175	56650984
ATP5F1B_chr12_56633175_56650984	0/0	g0036	1	1	0	0	0	0	ATP5F1B	chr12	56633175	56650984