JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATP5MF_chr7_99453195_99471167	0/0	g0074	1	0	1	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0075	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0076	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0077	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0078	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0079	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0080	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0081	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0082	1	0	0	1	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0083	1	0	0	1	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0084	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0085	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0086	1	1	0	0	0	0	ATP5MF	chr7	99453195	99471167
ATP5MF_chr7_99453195_99471167	0/0	g0087	1	0	0	1	0	0	ATP5MF	chr7	99453195	99471167
ATP5MGL_chr22_42634803_42645601	1/1	g0000	374	92	72	148	10	50	ATP5MGL	chr22	42634803	42645601
ATP5MG_chr11_118396606_118414847	1/0	g0001	120	29	19	57	6	8	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0002	65	5	4	48	0	8	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0003	20	0	3	14	2	1	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0004	11	0	0	11	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0005	6	6	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0006	5	5	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0007	5	0	1	0	0	4	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0008	5	1	0	2	0	2	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0009	4	0	0	2	0	2	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0010	4	0	0	0	0	4	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0011	4	0	0	4	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0012	4	4	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0013	4	0	4	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0014	4	2	2	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/1	g0015	3	0	2	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0016	3	0	0	3	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0017	3	2	1	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0018	3	0	0	0	3	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0019	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0020	2	1	0	1	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0021	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0022	2	0	0	2	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0023	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0024	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0025	2	1	0	1	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0026	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0027	2	1	1	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0028	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0029	2	1	0	1	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0030	2	2	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0031	1	0	0	0	0	1	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0032	1	1	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0033	1	1	0	0	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0034	1	0	0	1	0	0	ATP5MG	chr11	118396606	118414847
ATP5MG_chr11_118396606_118414847	0/0	g0035	1	0	0	0	1	0	ATP5MG	chr11	118396606	118414847