JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATP5PB_chr1_111444464_111467773	0/0	g0099	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0100	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0101	1	1	0	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0102	1	0	0	0	0	1	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0103	1	1	0	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0104	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0105	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0106	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0107	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0108	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0109	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0110	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0111	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0112	1	0	0	0	1	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0113	1	0	0	1	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0114	1	1	0	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0115	1	1	0	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0116	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0117	1	1	0	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PB_chr1_111444464_111467773	0/0	g0118	1	0	1	0	0	0	ATP5PB	chr1	111444464	111467773
ATP5PD_chr17_75033863_75051969	0/0	g0001	61	3	14	31	4	9	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0002	60	4	5	46	0	5	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0003	48	14	7	14	3	10	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	1/0	g0004	31	1	12	11	4	2	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0005	13	12	1	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0006	8	0	5	3	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0007	7	6	1	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0008	7	0	1	3	0	3	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0009	6	0	0	5	0	1	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0010	6	0	0	6	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0011	5	4	1	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0012	5	0	5	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0013	4	0	4	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0014	4	4	0	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0015	4	0	1	0	2	1	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0016	4	0	1	2	0	1	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0017	4	3	0	1	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0018	4	3	1	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0019	4	3	1	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0020	4	0	1	3	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0021	3	0	1	2	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0022	3	0	1	2	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0023	3	0	0	0	0	3	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0024	3	3	0	0	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0025	3	0	0	3	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0026	3	0	0	3	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/1	g0027	2	0	0	0	0	1	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0028	2	0	1	1	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0029	2	0	0	2	0	0	ATP5PD	chr17	75033863	75051969
ATP5PD_chr17_75033863_75051969	0/0	g0030	2	0	0	2	0	0	ATP5PD	chr17	75033863	75051969