JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATP5PF_chr21_25719500_25739904	0/0	g0155	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0156	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0157	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0158	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0159	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0160	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0161	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0162	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0163	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0164	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0165	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0166	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0167	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0168	1	0	0	0	0	1	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0169	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0170	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0171	1	0	1	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0172	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0173	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0174	1	0	1	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0175	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0176	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0177	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0178	1	0	0	0	0	1	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0179	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0180	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0181	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0182	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0183	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0184	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0185	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0186	1	1	0	0	0	0	ATP5PF	chr21	25719500	25739904
ATP5PF_chr21_25719500_25739904	0/0	g0187	1	0	0	1	0	0	ATP5PF	chr21	25719500	25739904
ATP5PO_chr21_33898453_33920804	0/0	g0001	33	8	1	23	0	1	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0002	30	0	7	16	2	5	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/1	g0003	25	0	3	11	5	5	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0004	21	1	2	13	2	3	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0005	19	0	5	13	0	1	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0006	17	1	7	8	0	1	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0007	15	0	0	15	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0008	12	0	1	8	0	3	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0009	11	0	2	8	0	1	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0010	10	0	0	10	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0011	9	0	8	0	1	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0012	6	5	1	0	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0013	6	0	0	6	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0014	6	0	3	1	0	2	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0015	5	0	0	5	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0016	5	0	3	2	0	0	ATP5PO	chr21	33898453	33920804
ATP5PO_chr21_33898453_33920804	0/0	g0017	5	3	0	0	2	0	ATP5PO	chr21	33898453	33920804