JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ATP6V0B_chr1_43969960_43983295	0/0	g0017	1	0	1	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0018	1	0	0	1	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0019	1	1	0	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0020	1	0	1	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0021	1	1	0	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0022	1	0	1	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0023	1	0	0	0	1	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0024	1	1	0	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0025	1	0	0	1	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0026	1	0	1	0	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0B_chr1_43969960_43983295	0/0	g0027	1	0	0	1	0	0	ATP6V0B	chr1	43969960	43983295
ATP6V0C_chr16_2508952_2525218	0/0	g0001	97	23	27	36	4	7	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	1/0	g0002	44	19	5	12	0	7	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0003	29	0	8	16	0	5	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0004	17	5	9	2	1	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0005	13	0	3	6	0	4	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0006	12	3	5	2	0	2	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0007	10	1	1	8	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0008	9	9	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0009	6	6	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0010	6	1	1	4	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0011	6	2	2	1	0	1	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0012	3	0	0	3	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0013	3	0	0	3	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/1	g0014	3	0	1	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0015	3	0	0	1	0	2	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0016	2	0	0	2	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0017	2	2	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0018	2	2	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0019	2	0	1	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0020	2	1	0	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0021	2	0	0	1	0	1	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0022	2	1	0	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0023	2	0	0	2	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0024	2	1	0	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0025	2	0	0	1	0	1	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0026	2	0	0	2	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0027	2	0	2	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0028	2	0	0	2	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0029	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0030	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0031	1	0	0	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0032	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0033	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0034	1	0	0	1	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0035	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0036	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0037	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0038	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218
ATP6V0C_chr16_2508952_2525218	0/0	g0039	1	1	0	0	0	0	ATP6V0C	chr16	2508952	2525218