JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACAD11_chr3_132553141_132664809	0/0	g0293	1	1	0	0	0	0	ACAD11	chr3	132553141	132664809
ACAD11_chr3_132553141_132664809	0/0	g0294	1	1	0	0	0	0	ACAD11	chr3	132553141	132664809
ACAD8_chr11_134248568_134270855	0/0	g0001	84	6	16	51	1	10	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0002	63	8	17	32	3	3	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0003	57	0	3	42	1	11	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0004	46	3	10	27	0	6	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0005	19	11	3	5	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0006	12	4	2	5	0	1	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0007	10	1	5	0	4	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0008	9	0	0	9	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0009	9	0	6	3	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0010	8	4	1	0	2	1	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0011	8	8	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0012	7	7	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0013	7	6	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0014	6	0	0	6	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0015	5	5	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0016	5	0	2	0	3	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0017	4	3	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0018	4	4	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0019	4	0	0	4	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0020	3	0	3	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0021	3	2	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0022	3	0	3	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0023	3	0	0	3	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0024	3	0	1	0	0	2	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0025	3	0	0	3	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0026	2	2	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0027	2	0	0	0	1	1	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0028	2	2	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0029	2	2	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0030	2	0	0	2	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0031	2	1	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0032	2	0	0	2	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0033	2	2	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0034	2	1	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0035	1	1	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0036	1	1	0	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0037	1	0	0	1	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0038	1	0	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0039	1	0	0	0	1	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0040	1	0	0	0	0	1	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0041	1	0	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0042	1	0	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0043	1	0	0	1	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0044	1	0	0	0	0	1	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0045	1	0	0	1	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0046	1	0	0	1	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0047	1	0	1	0	0	0	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	0/0	g0048	1	1	0	0	0	0	ACAD8	chr11	134248568	134270855