JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AVPI1_chr10_97672424_97692241	0/0	g0304	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0305	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0306	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0307	1	0	0	0	0	1	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0308	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0309	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0310	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0311	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0312	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0313	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0314	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0315	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0316	1	0	0	0	0	1	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0317	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0318	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0319	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0320	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0321	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0322	1	0	0	0	0	1	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0323	1	0	1	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0324	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0325	1	0	0	0	0	1	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0326	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0327	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0328	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0329	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0330	1	1	0	0	0	0	AVPI1	chr10	97672424	97692241
AVPI1_chr10_97672424_97692241	0/0	g0331	1	0	0	1	0	0	AVPI1	chr10	97672424	97692241
AVPR1A_chr12_63137759_63156201	1/0	g0001	94	8	13	60	4	8	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0002	24	0	9	14	1	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0003	19	2	5	8	3	1	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0004	18	0	6	12	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0005	14	0	0	10	0	4	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0006	12	4	3	0	1	4	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0007	11	0	2	6	0	3	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0008	9	0	0	9	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0009	8	0	5	0	0	3	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0010	8	0	0	8	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0011	7	0	0	7	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0012	5	5	0	0	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/1	g0013	5	4	0	0	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0014	5	5	0	0	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0015	5	0	1	1	0	3	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0016	5	0	0	4	0	1	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0017	5	0	0	5	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0018	5	5	0	0	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0019	4	0	3	1	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0020	4	0	0	4	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0021	3	3	0	0	0	0	AVPR1A	chr12	63137759	63156201
AVPR1A_chr12_63137759_63156201	0/0	g0022	3	3	0	0	0	0	AVPR1A	chr12	63137759	63156201