JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AWAT1_chrX_70229655_70245659	0/0	g0060	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0061	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/1	g0062	1	0	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0063	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0064	1	0	0	0	0	1	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0065	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0066	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0067	1	0	1	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0068	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0069	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0070	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0071	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0072	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0073	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0074	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0075	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0076	1	0	0	1	0	0	AWAT1	chrX	70229655	70245659
AWAT1_chrX_70229655_70245659	0/0	g0077	1	1	0	0	0	0	AWAT1	chrX	70229655	70245659
AWAT2_chrX_70035542_70054938	0/0	g0001	70	1	19	41	0	9	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0002	64	13	9	28	4	10	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0003	51	0	10	35	0	6	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	1/0	g0004	21	6	1	11	0	2	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0005	15	15	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0006	7	3	0	4	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0007	7	0	5	0	2	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0008	5	0	0	5	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0009	5	4	1	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0010	4	1	2	0	0	1	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0011	4	4	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0012	4	4	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0013	3	0	2	0	1	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0014	3	0	3	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0015	3	3	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0016	3	3	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0017	2	2	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0018	2	2	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0019	2	0	2	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0020	2	0	0	0	2	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0021	2	0	0	2	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0022	2	2	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0023	2	2	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0024	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/1	g0025	1	0	0	0	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0026	1	0	0	0	0	1	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0027	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0028	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0029	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0030	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0031	1	0	0	1	0	0	AWAT2	chrX	70035542	70054938
AWAT2_chrX_70035542_70054938	0/0	g0032	1	1	0	0	0	0	AWAT2	chrX	70035542	70054938