JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
B3GALNT2_chr1_235442190_235509452	0/0	g0307	1	0	0	0	1	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0308	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0309	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0310	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0311	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0312	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0313	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0314	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0315	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0316	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0317	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0318	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0319	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0320	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0321	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0322	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0323	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0324	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0325	1	0	1	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0326	1	0	1	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0327	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0328	1	0	0	0	0	1	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0329	1	0	0	0	0	1	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0330	1	0	0	0	0	1	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0331	1	0	0	0	0	1	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0332	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0333	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0334	1	0	1	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0335	1	0	0	1	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0336	1	0	0	1	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0337	1	0	0	1	0	0	B3GALNT2	chr1	235442190	235509452
B3GALNT2_chr1_235442190_235509452	0/0	g0338	1	1	0	0	0	0	B3GALNT2	chr1	235442190	235509452
B3GALT1_chr2_167288001_167879045	0/0	g0001	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0002	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0003	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0004	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0005	1	0	0	0	0	1	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0006	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0007	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0008	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0009	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0010	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0011	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0012	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0013	1	0	0	1	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0014	1	0	0	1	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0015	1	0	0	1	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0016	1	0	0	1	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0017	1	0	0	1	0	0	B3GALT1	chr2	167288001	167879045
B3GALT1_chr2_167288001_167879045	0/0	g0018	1	1	0	0	0	0	B3GALT1	chr2	167288001	167879045