JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACADS_chr12_120720826_120745008	0/0	g0246	1	0	0	0	1	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0247	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0248	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0249	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0250	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0251	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0252	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0253	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0254	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0255	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0256	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0257	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0258	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0259	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0260	1	1	0	0	0	0	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	0/0	g0261	1	0	0	1	0	0	ACADS	chr12	120720826	120745008
ACADVL_chr17_7214938_7230266	0/0	g0001	161	21	30	75	8	27	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	1/1	g0002	102	12	25	49	5	9	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0003	33	4	3	26	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0004	18	17	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0005	9	0	0	9	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0006	8	0	5	0	1	2	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0007	7	7	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0008	7	7	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0009	6	5	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0010	5	3	1	0	0	1	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0011	5	5	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0012	3	2	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0013	3	0	0	3	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0014	3	0	0	3	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0015	3	3	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0016	2	2	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0017	2	2	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0018	2	0	2	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0019	2	0	0	2	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0020	2	0	0	2	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0021	2	0	2	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0022	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0023	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0024	1	0	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0025	1	0	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0026	1	0	1	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0027	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0028	1	0	0	0	0	1	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0029	1	0	0	1	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0030	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0031	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0032	1	0	0	0	1	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0033	1	1	0	0	0	0	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	0/0	g0034	1	0	0	0	1	0	ACADVL	chr17	7214938	7230266