JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
B4GALT1_chr9_33105642_33172336	0/0	g0352	1	0	1	0	0	0	B4GALT1	chr9	33105642	33172336
B4GALT1_chr9_33105642_33172336	0/0	g0353	1	0	1	0	0	0	B4GALT1	chr9	33105642	33172336
B4GALT2_chr1_43974210_43996168	0/0	g0001	23	0	3	16	0	4	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0002	14	0	1	11	0	2	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0003	14	0	4	6	0	4	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0004	13	0	0	10	3	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0005	11	0	3	4	3	1	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0006	10	0	1	7	0	2	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/1	g0007	8	0	3	0	3	1	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0008	7	0	1	6	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0009	7	0	7	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0010	6	6	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0011	5	4	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0012	5	0	0	5	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0013	5	5	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0014	5	0	1	4	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0015	5	0	0	5	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0016	5	0	0	5	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0017	5	0	1	3	0	1	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0018	4	0	0	4	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0019	4	3	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0020	4	4	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0021	4	2	1	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0022	4	0	1	1	2	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0023	4	0	0	4	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0024	4	0	4	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0025	4	0	4	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0026	3	0	0	3	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0027	3	0	0	3	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0028	3	1	2	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0029	3	0	1	0	0	2	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0030	3	0	3	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0031	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0032	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0033	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0034	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0035	2	1	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0036	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0037	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0038	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0039	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0040	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0041	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0042	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0043	2	0	0	1	0	1	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0044	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0045	2	0	0	2	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0046	2	0	2	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0047	2	2	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0048	2	1	1	0	0	0	B4GALT2	chr1	43974210	43996168