JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
B4GALT2_chr1_43974210_43996168	0/0	g0199	1	1	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0200	1	0	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0201	1	0	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0202	1	0	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0203	1	1	0	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0204	1	0	0	0	0	1	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0205	1	0	1	0	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0206	1	0	0	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0207	1	0	0	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0208	1	0	0	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0209	1	0	0	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT2_chr1_43974210_43996168	0/0	g0210	1	0	0	1	0	0	B4GALT2	chr1	43974210	43996168
B4GALT3_chr1_161166310_161182507	1/0	g0001	155	30	36	55	9	24	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0002	73	3	14	43	4	9	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0003	25	1	2	20	2	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0004	16	13	0	3	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0005	11	3	3	3	1	1	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0006	10	9	1	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0007	8	1	5	0	1	1	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0008	7	0	0	7	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0009	6	0	2	4	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0010	6	0	0	6	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0011	5	0	0	5	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0012	4	0	0	4	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0013	4	0	0	4	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0014	3	0	0	3	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0015	3	3	0	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0016	2	0	0	2	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0017	2	2	0	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0018	2	0	0	2	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0019	2	0	1	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0020	2	0	0	2	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0021	1	0	1	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0022	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0023	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0024	1	0	0	0	0	1	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0025	1	1	0	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0026	1	0	0	0	0	1	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0027	1	0	1	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0028	1	0	0	0	1	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0029	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0030	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0031	1	0	0	0	0	1	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0032	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0033	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0034	1	1	0	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0035	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0036	1	0	0	1	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/1	g0037	1	0	0	0	0	0	B4GALT3	chr1	161166310	161182507
B4GALT3_chr1_161166310_161182507	0/0	g0038	1	1	0	0	0	0	B4GALT3	chr1	161166310	161182507