JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BAAT_chr9_101355417_101390006	0/0	g0139	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0140	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0141	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0142	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0143	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0144	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0145	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0146	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0147	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0148	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0149	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0150	1	0	0	0	0	1	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0151	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0152	1	0	0	0	0	1	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0153	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0154	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0155	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0156	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0157	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0158	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0159	1	0	0	0	1	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0160	1	0	0	0	0	1	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0161	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0162	1	0	0	1	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0163	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0164	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0165	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0166	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0167	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0168	1	0	1	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0169	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0170	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0171	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0172	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0173	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0174	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BAAT_chr9_101355417_101390006	0/0	g0175	1	1	0	0	0	0	BAAT	chr9	101355417	101390006
BABAM1_chr19_17262443_17284337	0/0	g0001	32	0	3	26	0	3	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0002	29	0	7	12	3	7	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0003	20	4	1	12	2	1	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0004	9	0	5	4	0	0	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0005	9	0	0	6	1	2	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0006	8	0	1	5	0	2	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0007	8	0	3	5	0	0	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0008	8	2	1	0	1	4	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0009	8	8	0	0	0	0	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/1	g0010	7	1	1	0	1	3	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0011	7	0	0	6	0	1	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0012	7	6	1	0	0	0	BABAM1	chr19	17262443	17284337
BABAM1_chr19_17262443_17284337	0/0	g0013	7	0	0	7	0	0	BABAM1	chr19	17262443	17284337