JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BATF3_chr1_212681417_212704840	0/0	g0258	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0259	1	0	0	0	0	1	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0260	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0261	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0262	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0263	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0264	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0265	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0266	1	0	0	0	0	1	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0267	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0268	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0269	1	0	0	0	0	1	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0270	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0271	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0272	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0273	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0274	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0275	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0276	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0277	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0278	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0279	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0280	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0281	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0282	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0283	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0284	1	0	0	1	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0285	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0286	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0287	1	0	0	0	0	1	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0288	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0289	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0290	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0291	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0292	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0293	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0294	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0295	1	0	1	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0296	1	1	0	0	0	0	BATF3	chr1	212681417	212704840
BATF3_chr1_212681417_212704840	0/0	g0297	1	0	0	0	0	1	BATF3	chr1	212681417	212704840
BATF_chr14_75517469_75551992	0/0	g0001	17	0	4	10	0	3	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0002	7	0	0	7	0	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0003	6	1	1	3	1	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0004	5	0	0	5	0	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0005	4	0	0	4	0	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0006	4	0	2	0	1	1	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0007	4	0	2	0	2	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0008	4	0	0	4	0	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0009	3	0	0	3	0	0	BATF	chr14	75517469	75551992
BATF_chr14_75517469_75551992	0/0	g0010	3	0	0	3	0	0	BATF	chr14	75517469	75551992