JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCL2A1_chr15_79955892_79976196	0/0	g0103	1	0	1	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0104	1	1	0	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0105	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0106	1	0	1	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0107	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0108	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0109	1	1	0	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0110	1	0	0	0	0	1	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0111	1	0	0	0	0	1	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0112	1	0	0	0	0	1	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0113	1	0	1	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0114	1	1	0	0	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0115	1	0	0	0	1	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0116	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0117	1	0	0	0	0	1	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0118	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0119	1	0	0	1	0	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0120	1	0	0	0	1	0	BCL2A1	chr15	79955892	79976196
BCL2A1_chr15_79955892_79976196	0/0	g0121	1	0	0	0	0	1	BCL2A1	chr15	79955892	79976196
BCL2L10_chr15_52104263_52117775	0/0	g0001	37	0	0	34	0	3	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	1/1	g0002	35	0	6	12	7	8	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0003	23	2	12	3	1	5	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0004	19	1	1	15	0	2	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0005	19	7	6	1	1	4	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0006	18	3	0	13	0	2	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0007	17	0	0	14	0	3	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0008	12	0	3	9	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0009	9	0	3	5	1	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0010	8	0	0	7	0	1	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0011	6	0	1	5	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0012	6	4	2	0	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0013	6	3	0	3	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0014	6	0	0	6	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0015	6	0	0	5	0	1	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0016	6	1	4	0	0	1	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0017	5	0	4	0	1	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0018	5	1	0	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0019	5	2	0	2	0	1	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0020	5	0	1	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0021	5	4	1	0	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0022	5	0	1	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0023	4	4	0	0	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0024	4	0	1	3	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0025	4	0	0	3	0	1	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0026	4	0	0	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0027	4	0	0	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0028	4	0	0	4	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0029	3	0	2	0	1	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0030	3	0	1	2	0	0	BCL2L10	chr15	52104263	52117775
BCL2L10_chr15_52104263_52117775	0/0	g0031	3	3	0	0	0	0	BCL2L10	chr15	52104263	52117775