Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AADAC_chr3_151809116_151833488	0/0	g0107	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0108	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0109	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0110	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0111	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0112	1	0	1	0	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0113	1	1	0	0	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0114	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0115	1	1	0	0	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0116	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	0/0	g0117	1	0	0	1	0	0	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	0/0	g0001	24	0	4	15	1	4	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0002	23	3	9	2	3	6	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0003	21	0	0	16	0	5	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0004	15	0	1	12	1	1	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0005	13	1	0	12	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0006	6	6	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0007	6	5	1	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0008	6	0	0	5	1	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0009	5	0	1	4	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0010	5	0	2	0	0	3	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0011	5	0	0	5	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0012	5	0	0	5	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0013	5	0	0	5	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0014	5	0	1	0	4	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0015	4	4	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0016	3	1	2	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0017	3	0	0	3	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0018	3	0	0	3	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0019	3	1	1	0	0	1	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0020	3	0	0	3	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0021	3	3	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0022	2	0	0	2	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0023	2	2	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0024	2	0	0	2	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0025	2	0	0	0	2	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0026	2	2	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0027	2	0	2	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0028	2	0	0	2	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	1/0	g0029	2	0	0	0	1	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0030	2	2	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0031	2	0	0	2	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0032	2	2	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0033	2	2	0	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0034	2	0	2	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0035	2	0	0	0	0	2	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0036	2	0	2	0	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0037	2	0	0	0	0	2	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0038	2	0	0	2	0	0	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	0/0	g0039	2	0	0	2	0	0	AADAT	chr4	170055222	170094956