JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCL2L14_chr12_12065939_12104695	0/0	g0364	1	0	1	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0365	1	0	1	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0366	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0367	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0368	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0369	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0370	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0371	1	0	0	1	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0372	1	0	1	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0373	1	1	0	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0374	1	1	0	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0375	1	0	1	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0376	1	0	0	0	1	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0377	1	0	1	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0378	1	1	0	0	0	0	BCL2L14	chr12	12065939	12104695
BCL2L14_chr12_12065939_12104695	0/0	g0379	1	0	0	0	0	1	BCL2L14	chr12	12065939	12104695
BCL2L15_chr1_113871816_113892581	0/0	g0001	59	2	12	41	2	2	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0002	37	9	8	12	2	6	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/1	g0003	30	0	10	8	2	9	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0004	25	1	6	16	0	2	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0005	11	0	3	8	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0006	11	0	0	11	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0007	11	0	5	3	2	1	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0008	10	0	0	10	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0009	9	0	9	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0010	7	0	0	7	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0011	7	0	4	0	1	2	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0012	7	0	0	7	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0013	6	5	1	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0014	6	4	1	1	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0015	6	6	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0016	6	0	0	6	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0017	6	0	0	6	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0018	6	0	0	6	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0019	5	0	0	5	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0020	4	4	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0021	4	4	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0022	4	0	3	1	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0023	4	0	0	4	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0024	4	0	0	4	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0025	4	0	1	3	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0026	3	3	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0027	3	3	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0028	3	0	0	3	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0029	3	0	1	2	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0030	3	0	0	1	0	2	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0031	2	0	0	0	0	2	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0032	2	0	0	0	2	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0033	2	2	0	0	0	0	BCL2L15	chr1	113871816	113892581
BCL2L15_chr1_113871816_113892581	0/0	g0034	2	0	0	0	0	2	BCL2L15	chr1	113871816	113892581