JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCL2_chr18_63118346_63324769	0/0	g0234	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0235	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0236	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0237	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0238	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0239	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0240	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0241	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0242	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0243	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0244	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0245	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0246	1	0	0	0	0	1	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0247	1	0	0	0	0	1	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0248	1	0	0	0	0	1	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0249	1	0	0	0	0	1	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0250	1	0	0	0	0	1	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0251	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0252	1	0	1	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0253	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0254	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0255	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0256	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0257	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0258	1	0	1	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0259	1	0	1	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0260	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0261	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0262	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	0/0	g0263	1	1	0	0	0	0	BCL2	chr18	63118346	63324769
BCL2_chr18_63118346_63324769	1/0	g0264	1	0	0	0	0	0	BCL2	chr18	63118346	63324769
BCL3_chr19_44743708_44765044	1/1	g0001	24	0	6	10	1	5	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0002	21	3	6	9	0	3	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0003	20	1	4	11	1	3	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0004	12	0	1	8	0	3	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0005	11	1	1	8	0	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0006	10	4	2	1	2	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0007	9	9	0	0	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0008	8	1	1	2	2	2	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0009	7	0	4	3	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0010	7	2	0	5	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0011	5	0	2	0	2	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0012	4	4	0	0	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0013	4	0	3	0	0	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0014	4	0	1	2	0	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0015	4	0	0	3	0	1	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0016	3	3	0	0	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0017	3	0	2	0	1	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0018	3	0	0	3	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0019	3	1	0	2	0	0	BCL3	chr19	44743708	44765044