JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCL3_chr19_44743708_44765044	0/0	g0170	1	0	1	0	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0171	1	0	0	1	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0172	1	0	0	1	0	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0173	1	0	0	0	1	0	BCL3	chr19	44743708	44765044
BCL3_chr19_44743708_44765044	0/0	g0174	1	0	1	0	0	0	BCL3	chr19	44743708	44765044
BCL6B_chr17_7018050_7034644	0/0	g0001	177	35	35	78	10	19	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0002	32	9	0	16	0	7	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/1	g0003	32	1	18	10	1	1	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0004	31	12	1	16	0	2	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0005	14	0	2	9	0	3	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0006	10	9	1	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	1/0	g0007	9	6	1	1	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0008	7	2	0	5	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0009	4	4	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0010	4	0	2	0	0	2	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0011	3	3	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0012	3	2	0	0	0	1	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0013	3	3	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0014	2	0	0	2	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0015	2	0	0	2	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0016	2	0	0	2	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0017	2	0	0	0	0	2	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0018	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0019	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0020	1	0	1	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0021	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0022	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0023	1	0	0	1	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0024	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0025	1	0	0	1	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0026	1	0	1	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0027	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0028	1	0	0	1	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0029	1	0	0	0	0	1	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0030	1	0	0	0	1	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0031	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0032	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0033	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0034	1	0	0	0	0	1	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0035	1	0	0	0	0	1	BCL6B	chr17	7018050	7034644
BCL6B_chr17_7018050_7034644	0/0	g0036	1	1	0	0	0	0	BCL6B	chr17	7018050	7034644
BCL6_chr3_187716381_187750468	0/0	g0001	4	4	0	0	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0002	3	0	0	3	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0003	3	3	0	0	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0004	3	3	0	0	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0005	3	0	1	2	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0006	3	0	0	3	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0007	3	0	0	3	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0008	2	0	0	2	0	0	BCL6	chr3	187716381	187750468
BCL6_chr3_187716381_187750468	0/0	g0009	2	0	0	2	0	0	BCL6	chr3	187716381	187750468