JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCL7C_chr16_30882795_30899077	0/0	g0051	1	0	0	0	0	1	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0052	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0053	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0054	1	0	1	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0055	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0056	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0057	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0058	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0059	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0060	1	0	0	0	0	1	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0061	1	0	0	0	0	1	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0062	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0063	1	0	0	0	0	1	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0064	1	0	1	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0065	1	0	0	0	0	1	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0066	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0067	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0068	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0069	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0070	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0071	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0072	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0073	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0074	1	1	0	0	0	0	BCL7C	chr16	30882795	30899077
BCL7C_chr16_30882795_30899077	0/0	g0075	1	0	0	1	0	0	BCL7C	chr16	30882795	30899077
BCL9L_chr11_118891136_118930926	0/0	g0001	11	0	0	11	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0002	9	0	2	7	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0003	8	0	4	0	0	4	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0004	6	0	0	1	1	4	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0005	6	5	1	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0006	5	0	0	5	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0007	5	1	1	2	0	1	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0008	5	0	2	2	1	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0009	4	4	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0010	4	0	2	1	0	1	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0011	3	3	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0012	3	0	0	2	0	1	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0013	3	1	2	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0014	3	3	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0015	3	0	1	0	0	2	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0016	2	0	0	1	1	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0017	2	2	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0018	2	0	1	0	0	1	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0019	2	0	0	0	0	2	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0020	2	1	0	1	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0021	2	2	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0022	2	2	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0023	2	2	0	0	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0024	2	0	0	2	0	0	BCL9L	chr11	118891136	118930926
BCL9L_chr11_118891136_118930926	0/0	g0025	2	2	0	0	0	0	BCL9L	chr11	118891136	118930926