JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BCO1_chr16_81233689_81296142	0/0	g0360	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0361	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0362	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0363	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0364	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0365	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0366	1	0	0	0	0	1	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0367	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0368	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0369	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0370	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0371	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0372	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0373	1	1	0	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0374	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0375	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0376	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0377	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0378	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0379	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0380	1	0	0	0	1	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0381	1	0	0	0	0	1	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0382	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0383	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0384	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0385	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0386	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0387	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0388	1	0	0	1	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0389	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0390	1	0	1	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0391	1	0	0	0	0	1	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0392	1	1	0	0	0	0	BCO1	chr16	81233689	81296142
BCO1_chr16_81233689_81296142	0/0	g0393	1	1	0	0	0	0	BCO1	chr16	81233689	81296142
BCO2_chr11_112170512_112223946	0/0	g0001	4	1	2	0	0	1	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0002	3	3	0	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0003	2	0	0	1	0	1	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0004	2	0	2	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0005	2	0	0	2	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0006	2	0	0	2	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0007	2	0	0	0	1	1	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0008	2	0	0	0	0	2	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0009	2	0	2	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0010	2	0	1	1	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0011	2	0	1	0	0	1	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0012	2	0	2	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/1	g0013	2	0	1	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0014	1	1	0	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0015	1	1	0	0	0	0	BCO2	chr11	112170512	112223946
BCO2_chr11_112170512_112223946	0/0	g0016	1	0	0	1	0	0	BCO2	chr11	112170512	112223946