JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BEND4_chr4_42105853_42157655	0/0	g0130	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0131	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0132	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0133	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0134	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0135	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0136	1	0	0	0	0	1	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0137	1	0	0	0	0	1	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0138	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0139	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0140	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0141	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0142	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0143	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0144	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0145	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0146	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0147	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0148	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0149	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0150	1	0	0	0	1	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0151	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0152	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0153	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0154	1	0	0	1	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0155	1	0	0	0	0	1	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0156	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0157	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0158	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0159	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0160	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0161	1	0	1	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0162	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0163	1	0	0	0	1	0	BEND4	chr4	42105853	42157655
BEND4_chr4_42105853_42157655	0/0	g0164	1	1	0	0	0	0	BEND4	chr4	42105853	42157655
BEND5_chr1_48722519_48781891	0/0	g0001	6	0	0	6	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0002	4	0	1	3	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0003	4	0	1	3	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0004	4	0	0	3	1	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0005	3	0	0	3	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0006	3	3	0	0	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0007	3	0	0	3	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0008	3	0	0	3	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0009	2	0	0	2	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0010	2	0	2	0	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0011	2	0	1	1	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0012	2	0	0	2	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0013	2	0	0	0	0	2	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0014	2	0	0	2	0	0	BEND5	chr1	48722519	48781891
BEND5_chr1_48722519_48781891	0/0	g0015	2	0	0	2	0	0	BEND5	chr1	48722519	48781891