JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACBD7_chr10_15070475_15093776	0/0	g0188	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0189	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0190	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0191	1	0	1	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0192	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0193	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0194	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0195	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0196	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0197	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0198	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0199	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0200	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0201	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0202	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	0/0	g0203	1	1	0	0	0	0	ACBD7	chr10	15070475	15093776
ACCSL_chr11_44042981_44064977	0/0	g0001	48	6	4	33	2	3	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0002	43	3	7	28	0	5	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	1/0	g0003	31	6	10	9	0	5	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0004	21	5	8	6	0	2	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0005	18	0	4	11	2	1	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0006	16	3	3	7	1	2	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0007	11	0	1	8	2	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0008	11	2	0	8	1	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0009	9	0	0	9	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0010	9	0	0	9	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/1	g0011	8	1	1	4	1	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0012	6	0	0	6	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0013	6	0	6	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0014	6	6	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0015	6	0	0	6	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0016	5	5	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0017	5	5	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0018	5	5	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0019	4	0	1	1	1	1	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0020	4	3	0	1	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0021	3	0	0	3	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0022	3	0	1	2	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0023	3	0	0	0	1	2	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0024	3	0	0	3	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0025	3	0	0	0	3	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0026	3	2	1	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0027	3	0	1	0	0	2	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0028	3	0	0	3	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0029	3	3	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0030	3	3	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0031	3	2	1	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0032	2	2	0	0	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0033	2	0	0	2	0	0	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	0/0	g0034	2	0	0	2	0	0	ACCSL	chr11	44042981	44064977