JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACCS_chr11_44061270_44089237	0/0	g0282	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0283	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0284	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0285	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0286	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0287	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0288	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0289	1	0	0	0	0	1	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0290	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0291	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0292	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	0/0	g0293	1	0	0	1	0	0	ACCS	chr11	44061270	44089237
ACD_chr16_67652512_67665260	1/1	g0001	97	3	18	54	6	14	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0002	64	21	15	15	4	9	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0003	35	28	3	0	0	4	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0004	20	1	13	3	0	3	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0005	16	13	0	3	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0006	9	0	2	7	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0007	3	3	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0008	2	2	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0009	2	2	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0010	2	2	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0011	2	2	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0012	2	2	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0013	1	0	0	0	0	1	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0014	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0015	1	0	0	0	0	1	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0016	1	0	0	1	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0017	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0018	1	0	0	1	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0019	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0020	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0021	1	0	0	1	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0022	1	0	1	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0023	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0024	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0025	1	1	0	0	0	0	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	0/0	g0026	1	0	0	1	0	0	ACD	chr16	67652512	67665260
ACE2_chrX_15556033_15605960	0/0	g0001	15	1	5	8	1	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0002	13	0	3	7	0	3	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0003	10	1	4	5	0	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0004	8	0	1	6	0	1	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0005	8	4	0	2	0	2	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0006	5	0	5	0	0	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0007	4	0	1	0	2	1	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0008	4	0	0	0	1	3	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0009	4	1	0	3	0	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0010	4	4	0	0	0	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0011	4	0	0	4	0	0	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	0/0	g0012	4	4	0	0	0	0	ACE2	chrX	15556033	15605960