JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BLVRB_chr19_40442768_40470745	0/0	g0313	1	0	0	1	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0314	1	1	0	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0315	1	0	1	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0316	1	0	0	1	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0317	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0318	1	1	0	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0319	1	0	1	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0320	1	0	1	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0321	1	0	0	0	1	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0322	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0323	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0324	1	0	0	0	1	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0325	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0326	1	0	1	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0327	1	0	0	0	1	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0328	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0329	1	0	1	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0330	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0331	1	0	0	0	0	1	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0332	1	1	0	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0333	1	1	0	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0334	1	1	0	0	0	0	BLVRB	chr19	40442768	40470745
BLVRB_chr19_40442768_40470745	0/0	g0335	1	0	0	1	0	0	BLVRB	chr19	40442768	40470745
BLZF1_chr1_169363195_169393305	0/0	g0001	33	1	3	23	0	6	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0002	24	0	0	20	0	4	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0003	22	0	3	19	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0004	20	1	12	7	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0005	15	1	0	14	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0006	10	1	3	1	1	4	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0007	8	1	0	7	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0008	7	2	2	3	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0009	7	0	4	0	0	3	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0010	7	0	2	0	3	2	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0011	6	5	1	0	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0012	6	3	0	1	2	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0013	5	1	1	3	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0014	5	2	2	0	0	1	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0015	5	0	0	3	0	2	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0016	5	0	4	0	1	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0017	5	3	1	0	0	1	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0018	3	3	0	0	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0019	3	0	1	0	1	1	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0020	3	3	0	0	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0021	3	0	2	0	0	1	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0022	3	1	0	2	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0023	3	0	0	3	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0024	3	0	2	1	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0025	3	0	0	3	0	0	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0026	3	0	0	0	1	2	BLZF1	chr1	169363195	169393305
BLZF1_chr1_169363195_169393305	0/0	g0027	3	0	3	0	0	0	BLZF1	chr1	169363195	169393305